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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7544947 chr1:151205303 A/G PIPSL chr10:95717948-95721297:- 0.34 6.08 2.41E-9 Box Plot
THCA rs75460922 chr11:60213566 A/G PRDM6 chr5:122424816-122529960:+ 0.61 5.98 4.33E-9 Box Plot
THCA rs7550127 chr1:26592871 C/T GLRX chr5:95087023-95158709:- 0.27 5.98 4.31E-9 Box Plot
THCA rs755048 chr5:45596358 T/C LOC647121 chr1:121260910-121313686:+ -0.4 -8.62 1.02E-16 Box Plot
THCA rs75507266 chr3:181273891 A/AG SMUG1 chr12:54515061-54582792:- -0.25 -5.93 5.76E-9 Box Plot
THCA rs75508816 chr2:90255768 G/A ZNF514 chr2:95813075-95831158:- -0.36 -6.61 1.02E-10 Box Plot
THCA rs7550997 chr1:26596080 G/A GLRX chr5:95087023-95158709:- 0.26 6 3.9E-9 Box Plot
THCA rs7551557 chr1:26596614 G/A GLRX chr5:95087023-95158709:- 0.27 5.98 4.31E-9 Box Plot
THCA rs75563590 chr5:46323523 A/G LOC647121 chr1:121260910-121313686:+ -0.37 -8 9.45E-15 Box Plot
THCA rs7557273 chr2:101189002 A/G LOC285359 chr3:101431278-101432259:+ 0.4 8.98 6.16E-18 Box Plot
THCA rs7559710 chr2:113274378 A/G RGPD5 chr2:110550335-110615272:+ -0.35 -6.04 3.12E-9 Box Plot
THCA rs7560296 chr2:132277962 T/C CCDC74B chr2:130896860-130902707:- 0.35 6.88 1.86E-11 Box Plot
THCA rs7561170 chr2:101064924 T/C LOC285359 chr3:101431278-101432259:+ 0.35 6.6 1.08E-10 Box Plot
THCA rs7561359 chr2:101051902 G/A LOC285359 chr3:101431278-101432259:+ 0.35 8.08 5.24E-15 Box Plot
THCA rs7561542 chr2:132233676 G/A TUBA3E chr2:130949316-130956034:- 0.54 6.2 1.2E-9 Box Plot